Fachbereich Chemie
Publikationen von Daniel N. Wilson
| Suche: FB Chemie / Hamburg | |
| 2024 | |
| 206 |
Visualizing how antibiotics interact with ribosomes Helge Paternoga , Daniel N. Wilson BIOspektrum 30, 158-161 (2024) |
| 205 |
Peptidyl-tRNA hydrolase is the nascent chain release factor in bacterial ribosome-associated quality control Maxim S. Svetlov, Clémence F. Dunand, Jose A. Nakamoto, Gemma C. Atkinson, Haaris A. Safdari, Daniel N. Wilson , Nora Vázquez-Laslop, Alexander S. Mankin Molecular Cell 84, 715-726 (2024) |
| 204 |
Structural basis of ribosomal 30S subunit degradation by RNase R Lyudmila Dimitrova-Paternoga, Sergo Kasvandik, Bertrand Beckert, Sander Granneman, Tanel Tenson, Daniel N. Wilson , Helge Paternoga Nature 626, 1133-1140 (2024) |
| 203 |
Paenilamicins are context-specific translocation inhibitors of protein synthesis Timm O. Koller , Max J. Berger, Martino Morici, Helge Paternoga , Timur Bulatov, Adriana di Stasi, Tam Dang, Andi Mainz, Karoline Raulf, Caillan Crowe-McAuliffe, Marco Scocchi, Mario Mardirossian, Bertrand Beckert, Nora Vázquez-Laslop, Alexander S. Mankin, Roderich D. Süssmuth, Daniel N. Wilson Nature Chemical Biology 20, 1691-1700 (2024) |
| 202 |
The SecM arrest peptide traps a pre-peptide bond formation state of the ribosome Felix Gersteuer, Martino Morici, Sara Gabrielli, Keigo Fujiwara, Haaris A. Safdari, Helge Paternoga , Lars V. Bock, Shinobu Chiba, Daniel N. Wilson Nature Communications 15, 2431 (16 pp) (2024) Erratum: Nature Communications 15, 3276 (2024) |
| 201 |
RAPP-containing arrest peptides induce translational stalling by short circuiting the ribosomal peptidyltransferase activity Martino Morici, Sara Gabrielli, Keigo Fujiwara, Helge Paternoga , Bertrand Beckert, Lars V. Bock, Shinobu Chiba, Daniel N. Wilson Nature Communications 15, 2432 (16 pp) (2024) Erratum: Nature Communications 15, 3242 (2024) |
| 200 |
Evolving precision: rRNA expansion segment 7S modulates translation velocity and accuracy in eukaryal ribosomes Robert Rauscher, Cristian Eggers, Lyudmila Dimitrova-Paternoga, Vaishnavi Shankar, Alessia Rosina, Marina Cristodero, Helge Paternoga , Daniel N. Wilson , Sebastian A. Leidel, Norbert Polacek Nucleic Acids Research 52, 4021-4036 (2024) |
| 199 |
A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis Hiraku Takada, Helge Paternoga , Keigo Fujiwara, Jose A. Nakamoto, Esther N. Park, Lyudmila Dimitrova-Paternoga, Bertrand Beckert, Merilin Saarma, Tanel Tenson, Allen R. Buskirk, Gemma C. Atkinson, Shinobu Chiba, Daniel N. Wilson , Vasili Hauryliuk Nucleic Acids Research 52, 8483-8499 (2024) Reprint: bioRxiv 2024.03.03.583159 (2024) |
| 198 |
The ABCF ATPase New1 resolves translation termination defects associated with specific tRNAArg and tRNALys isoacceptors in the P site Kathryn J. Turnbull , Helge Paternoga , Esther von der Weth, Artyom A. Egorov, Agnieszka A. Pochopien, Yujie Zhang, Lilit Nersisyan, Tõnu Margus, Marcus J. O. Johansson, Vicent Pelechano, Daniel N. Wilson , Vasili Hauryliuk Nucleic Acids Research 52, 12005-12020 (2024) |
2023 | |
| 197 |
The Myxobacterial Antibiotic Myxovalargin: Biosynthesis, Structural Revision, Total Synthesis, and Molecular Characterization of Ribosomal Inhibition Timm O. Koller , Ullrich Scheid, Teresa Kösel, Jennifer Herrmann, Daniel Krug, Helena I. M. Boshoff, Bertrand Beckert, Joanna C. Evans, Jan Schlemmer, Becky Sloan, Danielle M. Weiner, Laura E. Via, Atica Moosa, Thomas R. Ioerger, Michael Graf, Boris Zinshteyn, Maha Abdelshahid, Fabian Nguyen, Stefan Arenz, Franziska Gille, Maik Siebke, Tim Seedorf, Oliver Plettenburg, Rachel Green, Anna-Luisa Warnke, Joachim Ullrich, Ralf Warrass, Clifton E. Barry, Digby F. Warner, Valerie Mizrahi, Andreas Kirschning, Daniel N. Wilson , Rolf Müller Journal of the American Chemical Society 145, 851-863 (2023) Reprint: ChemRix 2022-vr3hn (2022) |
| 196 |
Full Profiling of GE81112A, an Underexplored Tetrapeptide Antibiotic with Activity against Gram-Negative Pathogens Sören M. M. Schuler, Gerrit Jürjens, Alexander Marker, Ulrike Hemmann, Astrid Rey, Stéphane Yvon, Marjorie Lagrevol, Mohamed Hamiti, Fabian Nguyen, Rolf Hirsch, Christoph Pöverlein, Andreas Vilcinskas, Peter Hammann, Daniel N. Wilson , Michael Mourez, Sebastien Coyne, Armin Bauer Microbiology Spectrum 11, 1-12 (2023) |
| 195 |
Ready, steady, go: Rapid ribosomal scanning to reach start codons Helge Paternoga , Daniel N. Wilson Molecular Cell 83, 9-11 (2023) |
| 194 |
Structural basis for translation inhibition by the glycosylated drosocin peptide Timm O. Koller , Martino Morici, Max Berger, Haaris A. Safdari, Deepti S. Lele, Bertrand Beckert, Kanwal J. Kaur, Daniel N. Wilson Nature Chemical Biology 19, 1072-1081 (2023) |
| 193 |
Structural
conservation of antibiotic interaction with ribosomes Helge Paternoga , Caillan Crowe-McAuliffe, Lars V. Bock, Timm O. Koller , Martino Morici, Bertrand Beckert, Alexander G. Myasnikov, Helmut Grubmüller, Jirí Novácek, Daniel N. Wilson Nature Structural & Molecular Biology 30, 1380-1392 (2023) |
| 192 |
Genome-encoded ABCF factors implicated in intrinsic antibiotic resistance in Gram-positive bacteria: VmlR2, Ard1 and CplR Nozomu Obana, Hiraku Takada, Caillan Crowe-McAuliffe, Mizuki Iwamoto, Artyom A. Egorov, Kelvin J. Y. Wu, Shinobu Chiba, Victoriia Murina, Helge Paternoga , Ben I. C. Tresco, Nobuhiko Nomura, Andrew G. Myers, Gemma C. Atkinson, Daniel N. Wilson , Vasili Hauryliuk Nucleic Acids Research 51, 4536-4554 (2023) |
2022 | |
| 191 |
Total synthesis and biological evaluation of paenilamicins from the honey bee pathogen Paenibacillus larvae Timur Bulatov, Sebastian Gensel, Andi Mainz, Tam Dang, Timm O. Koller , Kerstin Voigt, Julia Ebeling, Daniel N. Wilson , Elke Genersch, Roderich D. Süssmuth Journal of the American Chemical Society 144, 288-296 (2022) |
| 190 |
Structural basis for PoxtA-mediated resistance to phenicol and oxazolidinone antibiotics Caillan Crowe-McAuliffe, Victoriia Murina, Kathryn J. Turnbull , Susanne Huch, Marje Kasari, Hiraku Takada, Lilit Nersisyan, Arnfinn Sundsfjord, Kristin Hegstad, Gemma C. Atkinson, Vicent Pelechano, Daniel N. Wilson , Vasili Hauryliuk Nature Communications 13 (13 pp) 1860 (2022) |
| 189 |
Putting the antibiotics chloramphenicol and linezolid into context Caillan Crowe-McAuliffe, Daniel N. Wilson Nature Structural & Molecular Biology 29, 79-81 (2022) |
| 188 |
Structural basis for HflXr-mediated antibiotic resistance in Listeria monocytogenes Timm O. Koller , Kathryn J. Turnbull , Karolis Vaitkevicius, Caillan Crowe-McAuliffe, Mohammad Roghanian, Ondrej Bulvas, Jose A. Nakamoto, Tatsuaki Kurata, Christina Julius, Gemma C. Atkinson, Jörgen Johansson, Vasili Hauryliuk, Daniel N. Wilson Nucleic Acids Research 50, 11285-11300 (2022) |
| 187 |
Structure of Escherichia coli heat shock protein Hsp15 in complex with the ribosomal 50S subunit bearing peptidyl-tRNA Haaris A. Safdari, Sergo Kasvandik, Christine Polte, Zoya Ignatova , Tanel Tenson, Daniel N. Wilson Nucleic Acids Research 50, 12515-12526 (2022) |
| 186 |
The cyclic octapeptide antibiotic argyrin B inhibits translation by trapping EF-G on the ribosome during translocation Maximiliane Wieland, Mikael Holm, Emily J. Rundlet, Martino Morici, Timm O. Koller , Tinashe P. Maviza, Domen Pogorevc, Ilya A. Osterman, Rolf Müller, Scott C. Blanchard, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 119, e211421411 (9 pp) (2022) |
2021 | |
| 185 |
Yeast translation elongation factor eEF3 promotes late stages of tRNA translocation Namit Ranjan, Agnieszka A. Pochopien, Colin Chih-Chien Wu, Bertrand Beckert, Sandra Blanchet, Rachel Green, Marina V. Rodnina, Daniel N. Wilson EMBO Journal 40, e106449 (20 pp) (2021) |
| 184 |
Ribosome Rescue Pathways in Bacteria Claudia Müller, Caillan Crowe-McAuliffe, Daniel N. Wilson Frontiers in Microbiology 12, 652980 (20 pp) (2021) |
| 183 |
Structural Basis for Bacterial Ribosome-Associated Quality Control by RqcH and RqcP Caillan Crowe-McAuliffe, Hiraku Takada, Victoriia Murina, Christine Polte, Sergo Kasvandik, Tanel Tenson, Zoya Ignatova , Gemma C. Atkinson, Daniel N. Wilson , Vasili Hauryliuk Molecular Cell 81, 115-126.e7 (2021) |
| 182 |
Context-specific action of macrolide antibiotics on the eukaryotic ribosome Maxim S. Svetlov, Timm O. Koller , Sezen Meydan, Vaishnavi Shankar, Dorota Klepacki, Norbert Polacek, Nicholas R. Guydosh, Nora Vázquez-Laslop, Daniel N. Wilson , Alexander S. Mankin Nature Communications 12, 2803 (14 pp) (2021) |
| 181 |
Structural basis of ABCF-mediated resistance to pleuromutilin, lincosamide, and streptogramin A antibiotics in Gram-positive pathogens Caillan Crowe-McAuliffe, Victoriia Murina, Kathryn J. Turnbull , Marje Kasari, Merianne Mohamad, Christine Polte, Hiraku Takada, Karolis Vaitkevicius, Jörgen Johansson, Zoya Ignatova , Gemma C. Atkinson, Alex J. O'Neill, Vasili Hauryliuk, Daniel N. Wilson Nature Communications 12, 3577 (14 pp) (2021) |
| 180 |
Repurposing tRNAs for nonsense suppression Suki Albers , Bertrand Beckert, Marco C. Matthies, Chandra Sekhar Mandava, Raphael Schuster, Carolin Seuring , Maria Riedner , Suparna Sanyal, Andrew E. Torda , Daniel N. Wilson , Zoya Ignatova Nature Communications 12, 3850 (10 pp) (2021) |
| 179 |
Structural and mechanistic basis for translation inhibition by macrolide and ketolide antibiotics Bertrand Beckert, Elodie C. Leroy, Shanmugapriya Sothiselvam, Lars V. Bock, Maxim S. Svetlov, Michael Graf, Stefan Arenz, Maha Abdelshahid, Britta Seip, Helmut Grubmüller, Alexander S. Mankin, C. Axel Innis, Nora Vázquez-Laslop, Daniel N. Wilson Nature Communications 12, 4466 (15 pp) (2021) |
| 178 |
RqcH and RqcP catalyze processive poly-alanine synthesis in a reconstituted ribosome-associated quality control system Hiraku Takada, Caillan Crowe-McAuliffe, Christine Polte, Zhanna Yu Sidorova, Victoriia Murina, Gemma C. Atkinson, Andrey L. Konevega, Zoya Ignatova , Daniel N. Wilson , Vasili Hauryliuk Nucleic Acids Research 49, 8355-8369 (2021) |
| 177 |
Structure of Gcn1 bound to stalled and colliding 80S ribosomes Agnieszka A. Pochopien, Bertrand Beckert, Sergo Kasvandik, Otto Berninghausen, Roland Beckmann, Tanel Tenson, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 118, e2022756118 (8 pp) (2021) |
| 176 |
The Ribosome and Protein Synthesis Paul Huter, Michael Graf, Daniel N. Wilson -/- Herausgeber: Sabine Müller, Benoît Masquida, Wade Winkler Ribozymes 2, 193-226 (2021) |
2020 | |
| 175 |
eEF3 promotes late stages of tRNA translocation on the ribosome Namit Ranjan, Agnieszka A. Pochopien, Colin Chih-Chien Wu, Bertrand Beckert, Sandra Blanchet, Rachel Green, Marina V. Rodnina, Daniel N. Wilson bioRxiv 182105 (2020) |
| 174 |
Structural Basis for Regulation of the Opposing (p)ppGpp Synthetase and Hydrolase within the Stringent Response Orchestrator Rel Patrick Pausch, Maha Abdelshahid, Wieland Steinchen, Heinrich Schäfer, Fabio Lino Gratani, Sven-Andreas Freibert, Christiane Wolz, Kürsad Turgay, Daniel N. Wilson , Gert Bange Cell Reports 32, 108157 (19 pp) (2020) |
| 173 |
The 23S Ribosomal RNA From Pyrococcus furiosus Is Circularly Permuted Ulf Birkedal, Henrik Nielsen, Bertrand Beckert, Daniel N. Wilson , Henrik Nielsen Frontiers in Microbiology 11, 582022 (11 pp) (2020) |
| 172 |
Characterization of Cetacean Proline-Rich Antimicrobial Peptides Displaying Activity against ESKAPE Pathogens Riccardo Sola, Mario Mardirossian, Bertrand Beckert, Laura Sanghez de Luna, Dennis Prickett, Alessandro Tossi, Daniel N. Wilson , Marco Scocchi International Journal of Molecular Sciences 21, 7367 (17 pp) (2020) |
| 171 |
Peptide inhibitors of bacterial protein synthesis with broad spectrum and SbmA-independent bactericidal activity against clinical pathogens Mario Mardirossian, Riccardo Sola, Bertrand Beckert, Erica Valencic, Dominic W. P. Collis, Jure Borišek, Federica Armas, Adriana di Stasi, Jan Buchmann, Egor A. Syroegin, Yury S. Polikanov, Alessandra Magistrato, Kai Hilpert, Daniel N. Wilson , Marco Scocchi Journal of Medicinal Chemistry 63, 9590-9602 (2020) |
| 170 |
A bifunctional nitrone conjugated secondary metabolite targeting the ribosome Emilianne Limbrick, Michael Graf, Dagmara K Derewacz, Fabian Nguyen, Jeffrey M. Spraggins, Maximiliane Wieland, Audrey Ynigez-Gutierrez, Benjamin J Reisman, Boris Zinshteyn, Kathryn M. McCulloch, Tina M. Iverson, Rachel Green, Daniel N. Wilson , Brian O. Bachmann Journal of the American Chemical Society 142, 18369-18377 (2020) |
| 169 |
Tetracenomycin X inhibits translation by binding within the ribosomal exit tunnel Ilya A. Osterman, Maximiliane Wieland, Tinashe P. Maviza, Kseniya A. Lashkevich, Dmitrii A. Lukianov, Ekaterina S. Komarova, Yuliya V. Zakalyukina, Robert Buschauer, Dmitrii I. Shiriaev, Semen A. Leyn, Jaime E. Zlamal, Mikhail V. Biryukov, Dmitry A. Skvortsov, Vadim N. Tashlitsky, Vladimir I. Polshakov, Jingdong Cheng, Yury S. Polikanov, Alexey A. Bogdanov, Andrei L. Osterman, Sergey E. Dmitriev, Roland Beckmann, Olga A. Dontsova, Daniel N. Wilson , Petr V. Sergiev Nature Chemical Biology 16, 1071-1077 (2020) |
| 168 |
Mechanism of ribosome rescue by alternative ribosome-rescue factor B Kai-Hsin Chan, Valentyn Petrychenko, Claudia Müller, Cristina Maracci, Wolf Holtkamp, Daniel N. Wilson , Niels Fischer, Marina V. Rodnina Nature Communications 11, 4106 (11 pp) (2020) |
| 167 |
Target protection as a key antibiotic resistance mechanism Daniel N. Wilson , Vasili Hauryliuk, Gemma C. Atkinson, Alex J. O'Neill Nature Reviews Microbiology 18, 637-648 (2020) |
| 166 |
The alarmones (p)ppGpp are part of the heat shock response of Bacillus subtilis Heinrich Schäfer, Bertrand Beckert, Christian K. Frese, Wieland Steinchen, Aaron M. Nuss, Michael Beckstette, Ingo Hantke, Kristina Driller, Petra Sudzinová, Libor Krásný, Volkhard Kaever, Petra Dersch, Gert Bange, Daniel N. Wilson , Kürsad Turgay PLoS Genetics 16, e1008275 (34 pp) (2020) |
2019 | |
| 165 |
The natural product elegaphenone potentiates antibiotic effects against Pseudomonas aeruginosa (Der Naturstoff Elegaphenon verstärkt antibiotische Effekte gegen Pseudomonas aeruginosa) Weining Zhao, Ashley Renee Cross, Caillan Crowe-McAuliffe, Angela Weigert-Munoz, Erika Elizabeth Csatary, Amy Solinski, Joanna Krysiak, Joanna Goldberg, Daniel N. Wilson , Eva Medina, William Wuest, Stephan Axel Sieber Angewandte Chemie, International Edition 58, 8581-8584 (2019) Reprint: Angewandte Chemie 131, 8670-8674 (2019) |
| 164 |
A role for the Saccharomyces cerevisiae ABCF protein New1 during translation termination Villu Kasari, Agnieszka A. Pochopien, Tõnu Margus, Victoriia Murina, Yang Zhou, Tracy Nissan, Michael Graf, Jirí Novácek, Gemma C. Atkinson, Marcus J. O. Johansson, Daniel N. Wilson , Vasili Hauryliuk bioRxiv 638064v1, 26 pp (2019) |
| 163 |
Proline-rich peptides with improved antimicrobial activity against E. coli, K. pneumoniae and A. baumannii Mario Mardirossian, Riccardo Sola, Bertrand Beckert, Dominic W. P. Collis, Adriana di Stasi, Federica Armas, Kai Hilpert, Daniel N. Wilson , Marco Scocchi ChemMedChem 14, 2025-2033 (2019) Cover Picture: ChemMedChem 14, 2024-2024 (2019) (This article also appears in: Hot Topic: Membranes) |
| 162 |
Release factor-dependent ribosome rescue by BrfA in the Gram-positive bacterium Bacillus subtilis Naomi Shimokawa-Chiba, Claudia Müller, Keigo Fujiwara, Bertrand Beckert, Koreaki Ito, Daniel N. Wilson , Shinobu Chiba Nature Communications 10, 5397 (14 pp) (2019) Reprint: bioRxiv 732420 (2019) |
| 161 |
A role for the Saccharomyces cerevisiae ABCF protein New1 in translation termination/recycling Villu Kasari, Agnieszka A. Pochopien, Tõnu Margus, Victoriia Murina, Kathryn J. Turnbull , Yang Zhou, Tracy Nissan, Michael Graf, Jirí Novácek, Gemma C. Atkinson, Marcus J. O. Johansson, Daniel N. Wilson , Vasili Hauryliuk Nucleic Acids Research 47, 8807-8820 (2019) Reprint: bioRxiv 638064 (2019) |
| 160 |
Intracellular Antimicrobial Peptides Targeting the Protein Synthesis Machinery Michael Graf, Daniel N. Wilson Advances in Experimental Medicine and Biology 1117 (Antimicrobial Peptides) 73-89 (2019) |
2018 | |
| 159 |
Total Synthesis and Structural Revision of the Antibiotic Tetrapeptide GE81112A (Totalsynthese und Strukturkorrektur des antibiotisch wirksamen Tetrapeptids GE81112A) Gerrit Jürjens, Sören Manuel Michael Schuler, Michael Kurz, Sylvain Petit, Cédric Couturier, Frédéric Jeannot, Fabian Nguyen, Raffael Christoph Wende, Peter Eugen Hammann, Daniel N. Wilson , Eric Bacqué, Christoph Pöverlein, Armin Bauer Angewandte Chemie, International Edition 57, 12157-12161 (2018) Reprint: Angewandte Chemie 130, 12334-12338 (2018) |
| 158 |
Fragments of the Nonlytic Proline-Rich Antimicrobial Peptide Bac5 Kill Escherichia coli Cells by Inhibiting Protein Synthesis Mario Mardirossian, Quentin Barrière, Tatiana Timchenko, Claudia Müller, Sabrina Pacor, Peter Mergaert, Marco Scocchi, Daniel N. Wilson Antimicrobial Agents and Chemotherapy 62, e00534-18 (15 pp) (2018) |
| 157 |
The Dolphin Proline-Rich Antimicrobial Peptide Tur1A Inhibits Protein Synthesis by Targeting the Bacterial Ribosome Mario Mardirossian, Natacha Pérébaskine, Monica Benincasa, Stefano Gambato, Sven Hofmann, Paul Huter, Claudia Müller, Kai Hilpert, C. Axel Innis, Alessandro Tossi, Daniel N. Wilson Cell Chemical Biology 25, 530-539 (2018) |
| 156 |
The Mechanisms of Action of Ribosome-Targeting Peptide Antibiotics Yury S. Polikanov, Nikolay A. Aleksashin, Bertrand Beckert, Daniel N. Wilson Frontiers in Molecular Biosciences 5, 48 (21 pp) (2018) |
| 155 |
Structural basis for (p)ppGpp-mediated inhibition of the GTPase RbgA Patrick Pausch, Wieland Steinchen, Maximiliane Wieland, Thomas Klaus, Sven-Andreas Freibert, Florian Altegoer, Daniel N. Wilson , Gert Bange Journal of Biological Chemistry 293, 19699-19709 (2018) |
| 154 |
Visualization of translation termination intermediates trapped by the Apidaecin 137 peptide during RF3-mediated recycling of RF1 Michael Graf, Paul Huter, Cristina Maracci, Miroslav Peterek, Marina V. Rodnina, Daniel N. Wilson Nature Communications 9, 3053 (11 pp) (2018) |
| 153 |
Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1 Bertrand Beckert, Martin Turk, Andreas Czech , Otto Berninghausen, Roland Beckmann, Zoya Ignatova , Jürgen M. Plitzko, Daniel N. Wilson Nature Microbiology 3, 1115-1121 (2018) Reprint: bioRxiv 3, 382572 (39 pp) (2018) |
| 152 |
Structural basis for antibiotic resistance mediated by the Bacillus subtilis ABCF ATPase VmlR Caillan Crowe-McAuliffe, Michael Graf, Paul Huter, Hiraku Takada, Maha Abdelshahid, Jirí Novácek, Victoriia Murina, Gemma C. Atkinson, Vasili Hauryliuk, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 115, 8978-8983 (2018) |
| 151 |
Molekulare und strukturelle Grundlagen der Antibiotikaresistenz Maximiliane Wieland, Daniel N. Wilson Update Antibiotikaresistenz: Entstehung, Epidemiologie, Wirkstoffentwicklung 68-76 (2018), ISBN 978-3-7692-7113-3 , Verlag: Deutscher Apotheker Verlag |
2017 | |
| 150 |
The force-sensing peptide VemP employs extreme compaction and secondary structure formation to induce ribosomal stalling Ting Su, Jingdong Cheng, Daniel Sohmen, Rickard Hedman, Otto Berninghausen, Gunnar von Heijne, Daniel N. Wilson , Roland Beckmann eLife 6, e25642 (17 pp) (2017) |
| 149 |
Structure of the Bacillus subtilis hibernating 100S ribosome reveals the basis for 70S dimerization Bertrand Beckert, Maha Abdelshahid, Heinrich Schäfer, Wieland Steinchen, Stefan Arenz, Otto Berninghausen, Roland Beckmann, Gert Bange, Kürsad Turgay, Daniel N. Wilson EMBO Journal 36, 2061-2072 (2017) |
| 148 |
Myticalins: A Novel Multigenic Family of Linear, Cationic Antimicrobial Peptides from Marine Mussels (Mytilus spp.) Gabriele Leoni, Andrea de Poli, Mario Mardirossian, Stefano Gambato, Fiorella Florian, Paola Venier, Daniel N. Wilson , Alessandro Tossi, Alberto Pallavicini, Marco Gerdol Marine Drugs 15, 261 (23 pp) (2017) |
| 147 |
Structural Basis for Polyproline-Mediated Ribosome Stalling and Rescue by the Translation Elongation Factor EF-P Paul Huter, Stefan Arenz, Lars V. Bock, Michael Graf, Jan Ole Frister, André Heuer, Lauri Peil, Agata L. Starosta, Ingo Wohlgemuth, Frank Peske, Jirí Novácek, Otto Berninghausen, Helmut Grubmüller, Tanel Tenson, Roland Beckmann, Marina V. Rodnina, Andrea C. Vaiana, Daniel N. Wilson Molecular Cell 68, 515-527 (2017) |
| 146 |
Proline-rich antimicrobial peptides targeting protein synthesis Michael Graf, Mario Mardirossian, Fabian Nguyen, A. Carolin Seefeldt, Gilles Guichard, Marco Scocchi, C. Axel Innis, Daniel N. Wilson Natural Product Reports 34, 702-711 (2017) |
| 145 |
Structural basis for ArfA-RF2-mediated translation termination on mRNAs lacking stop codons Paul Huter, Claudia Müller, Bertrand Beckert, Stefan Arenz, Otto Berninghausen, Roland Beckmann, Daniel N. Wilson Nature 541, 546-549 (2017) |
| 144 |
An antimicrobial peptide that inhibits translation by trapping release factors on the ribosome Tanja Florin, Cristina Maracci, Michael Graf, Prajwal Karki, Dorota Klepacki, Otto Berninghausen, Roland Beckmann, Nora Vázquez-Laslop, Daniel N. Wilson , Marina V. Rodnina, Alexander S. Mankin Nature Structural & Molecular Biology 24, 752-757 (2017) |
| 143 |
Structural Basis for Ribosome Rescue in Bacteria Paul Huter, Claudia Müller, Stefan Arenz, Bertrand Beckert, Daniel N. Wilson Trends in Biochemical Sciences 42, 669-680 (2017) |
2016 | |
| 142 |
Deciphering the Translation Initiation Factor 5A Modification Pathway in Halophilic Archaea Laurence Prunetti, Michael Graf, Ian K. Blaby, Lauri Peil, Andrea M. Makkay, Agata L. Starosta, R. Thane Papke, Tairo Oshima, Daniel N. Wilson , Valérie de Crécy-Lagard Archaea 7316725 (14 pp) (2016) |
| 141 |
Bacterial
Protein Synthesis as a Target for Antibiotic Inhibition Stefan Arenz, Daniel N. Wilson Cold Spring Harbor Perspectives in Biology 6 (9) a025361 (15 pp) (2016) |
| 140 |
Translation regulation via nascent polypeptide-mediated ribosome stalling Daniel N. Wilson , Stefan Arenz, Roland Beckmann Current Opinion in Structural Biology 37, 123-133 (2016) |
| 139 |
Ribosomes Structure and Mechanisms in Regulation of Protein Synthesis Part I. Daniel N. Wilson , Christian M. T. Spahn, Marat Yusupov Journal of Molecular Biology 428, 2133-213310.1016/j.jmb.2016.05.002 (2016) |
| 138 |
The ABC of Ribosome-Related Antibiotic Resistance Daniel N. Wilson mBio 7 (3) e00598-16 (3 pp) (2016) |
| 137 |
Blast from the Past: Reassessing forgotten translation inhibitors, antibiotic selectivity, and resistance mechanisms to aid drug development Stefan Arenz, Daniel N. Wilson Molecular Cell 61, 3-14 (2016) |
| 136 |
Stall no more at polyproline stretches with the translation elongation factors EF-P and IF-5A Jürgen Lassak, Daniel N. Wilson , Kirsten Jung Molecular Microbiology 99, 219-235 (2016) |
| 135 |
A combined cryo-EM and molecular dynamics approach reveals the mechanism of ErmBL-mediated translation arrest Stefan Arenz, Lars V. Bock, Michael Graf, C. Axel Innis, Roland Beckmann, Helmut Grubmüller, Andrea C. Vaiana, Daniel N. Wilson Nature Communications 7, 12026 (2016) |
| 134 |
Knud Hermann Nierhaus 1941-2016 Daniel N. Wilson , Christian M. T. Spahn Nature Structural & Molecular Biology 23, 503-504 (2016) (Thema: Knud H. Nierhaus) |
| 133 |
Climbing to the peak of nascent-chain knowledge Daniel N. Wilson , Patricia L. Clark Nature Structural & Molecular Biology 23, 949-951 (2016) |
| 132 |
Structure of the hypusinylated eukaryotic translation factor eIF-5A bound to the ribosome Christian Schmidt, Thomas Becker, André Heuer, Katharina Braunger, Vivekanandan Shanmuganathan, Markus Pech, Otto Berninghausen, Daniel N. Wilson , Roland Beckmann Nucleic Acids Research 44, 1944-1951 (2016) |
| 131 |
Structure of the mammalian antimicrobial peptide Bac7(1-16) bound within the exit tunnel of a bacterial ribosome A. Carolin Seefeldt, Michael Graf, Natacha Pérébaskine, Fabian Nguyen, Stefan Arenz, Mario Mardirossian, Marco Scocchi, Daniel N. Wilson , C. Axel Innis Nucleic Acids Research 44, 2429-2438 (2016) |
| 130 |
The stringent factor RelA adopts an open conformation on the ribosome to stimulate ppGpp synthesis Stefan Arenz, Maha Abdelshahid, Daniel Sohmen, Agata L. Starosta, Otto Berninghausen, Roshani Payoe, Vasili Hauryliuk, Roland Beckmann, Daniel N. Wilson Nucleic Acids Research 44, 6471-6481 (2016) |
| 129 |
Cryo-EM structure of the spinach chloroplast ribosome reveals the location of plastid-specific ribosomal proteins and extensions Michael Graf, Stefan Arenz, Paul Huter, Alexandra Dönhöfer, Jirí Novácek, Daniel N. Wilson Nucleic Acids Research 45, 2887-2896 (2016) |
| 128 |
Structures of the orthosomycin antibiotics avilamycin and evernimicin in complex with the bacterial 70S ribosome Stefan Arenz, Manuel F. Juette, Michael Graf, Fabian Nguyen, Paul Huter, Yury S. Polikanov, Scott C. Blanchard, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 113, 7527-7532 (2016) |
2015 | |
| 127 |
Entropic contribution of elongation factor P to proline positioning at the catalytic center of the ribosome Lili K. Doerfel, Ingo Wohlgemuth, Vladimir Kubyshkin, Agata L. Starosta, Daniel N. Wilson , Nediljko Budisa, Marina V. Rodnina Journal of the American Chemical Society 137, 12997-13006 (2015) |
| 126 |
Distinct tRNA Accommodation Intermediates Observed on the Ribosome with the Antibiotics Hygromycin A and A201A Yury S. Polikanov, Agata L. Starosta, Manuel F. Juette, Roger B. Altman, Daniel S. Terry, Wanli Lu, Benjamin J. Burnett, George P. Dinos, Kevin A. Reynolds, Scott C. Blanchard, Thomas A. Steitz, Daniel N. Wilson Molecular Cell 58, 832-844 (2015) |
| 125 |
Arginine-rhamnosylation as new strategy to activate translation elongation factor P Jürgen Lassak, Eva C Keilhauer, Maximilian Fürst, Kristin Wuichet, Julia Gödeke, Agata L. Starosta, Jhong-Min Chen, Lotte Søgaard-Andersen, Jürgen Rohr, Daniel N. Wilson , Susanne Häussler, Matthias Mann, Kirsten Jung Nature Chemical Biology 11, 266-270 (2015) Erratum: Nature Chemical Biology 11, 299-299 (2015) |
| 124 |
Structure of the Bacillus subtilis 70S ribosome reveals the basis for species-specific stalling Daniel Sohmen, Shinobu Chiba, Naomi Shimokawa-Chiba, C. Axel Innis, Otto Berninghausen, Roland Beckmann, Koreaki Ito, Daniel N. Wilson Nature Communications 6, 6941 (2015) |
| 123 |
The proline-rich antimicrobial peptide Onc112 inhibits translation by blocking and destabilizing the initiation complex A. Carolin Seefeldt, Fabian Nguyen, Stéphanie Antunes, Natacha Pérébaskine, Michael Graf, Stefan Arenz, K. Kishore Inampudi, Céline Douat, Gilles Guichard, Daniel N. Wilson , C. Axel Innis Nature Structural & Molecular Biology 22, 470-475 (2015) |
| 122 |
Translational arrest by a prokaryotic signal recognition particle is mediated by RNA interactions Bertrand Beckert, Alexej Kedrov, Daniel Sohmen, Georg Kempf, Klemens Wild, Irmgard Sinning, Henning Stahlberg, Daniel N. Wilson , Roland Beckmann Nature Structural & Molecular Biology 22, 767-773 (2015) |
| 121 |
Structural basis for the interaction of protein S1 with the Escherichia coli ribosome Konstantin Byrgazov, Irina Grishkovskaya, Stefan Arenz, Nicolas Coudevylle, Hannes Temmel, Daniel N. Wilson , Kristina Djinovic-Carugo, Isabella Moll Nucleic Acids Research 43, 661-673 (2015) |
| 120 |
Antimicrobial peptides target ribosomes Daniel N. Wilson , Gilles Guichard, C. Axel Innis Oncotarget 6, 16826-16827 (2015) |
| 119 |
Cryo-EM structure of the tetracycline resistance protein TetM in complex with a translating ribosome at 3.9-Å resolution Stefan Arenz, Fabian Nguyen, Roland Beckmann, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 112, 5401-5406 (2015) |
2014 | |
| 118 |
Insights into the mode of action of novel fluoroketolides, potent inhibitors of bacterial protein synthesis Marios G. Krokidis, Viter Márquez, Daniel N. Wilson , Dimitrios L. Kalpaxis, George P. Dinos Antimicrobial Agents and Chemotherapy 58, 472-480 (2014) |
| 117 |
Tetracycline antibiotics and resistance mechanisms Fabian Nguyen, Agata L. Starosta, Stefan Arenz, Daniel Sohmen, Alexandra Dönhöfer, Daniel N. Wilson Biological Chemistry 395, 559-575 (2014) |
| 116 |
Ribosome Rescue, Nearing the End Agata L. Starosta, Daniel N. Wilson Cell 156, 866-867 (2014) |
| 115 |
A Conserved Proline Triplet in Val-tRNA Synthetase and the Origin of Elongation Factor P Agata L. Starosta, Jürgen Lassak, Lauri Peil, Gemma C. Atkinson, Christopher J. Woolstenhulme, Kai Virumäe, Allen R. Buskirk, Tanel Tenson, Jaanus Remme, Kirsten Jung, Daniel N. Wilson Cell Reports 9, 476-483 (2014) |
| 114 |
A new system for naming ribosomal proteins Nenad Ban, Roland Beckmann, Jamie H. D. Cate, Jonathan D. Dinman, François Dragon, Steven R. Ellis, Denis L. J. Lafontaine, Lasse Lindahl, Anders Liljas, Jeffrey M. Lipton, Michael A. McAlear, Peter B. Moore, Harry F. Noller, Joaquin Ortega, Vikram Govind Panse, V. Ramakrishnan, Christian M. T. Spahn, Thomas A. Steitz, Marek Tchorzewski, David Tollervey, Alan J. Warren, James R. Williamson, Daniel N. Wilson , Ada E. Yonath, Marat Yusupov Current Opinion in Structural Biology 24, 165-169 (2014) |
| 113 |
The bacterial translation stress response Agata L. Starosta, Jürgen Lassak, Kirsten Jung, Daniel N. Wilson FEMS Microbiology Reviews 38, 1172-1201 (2014) |
| 112 |
Drug Sensing by the Ribosome Induces Translational Arrest via Active Site Perturbation Stefan Arenz, Sezen Meydan, Agata L. Starosta, Otto Berninghausen, Roland Beckmann, Nora Vázquez-Laslop, Daniel N. Wilson Molecular Cell 56, 446-452 (2014) |
| 111 |
Molecular basis for erythromycin-dependent ribosome stalling during translation of the ErmBL leader peptide Stefan Arenz, Haripriya Ramu, Pulkit Gupta, Otto Berninghausen, Roland Beckmann, Nora Vázquez-Laslop, Alexander S. Mankin, Daniel N. Wilson Nature Communications 5, 3501 (2014) |
| 110 |
Ribosome-targeting antibiotics and mechanisms of bacterial resistance Daniel N. Wilson Nature Reviews Microbiology 12, 35-48 (2014) |
| 109 |
Entrapment of DNA in an intersubunit tunnel system of a single-stranded DNA-binding protein Homa Ghalei, Holger von Moeller, Detlef Eppers, Daniel Sohmen, Daniel N. Wilson , Bernhard Loll, Markus C. Wahl Nucleic Acids Research 42, 6698-6708 (2014) |
| 108 |
Translational stalling at polyproline-stretches is modulated by the sequence context upstream of the stall site Agata L. Starosta, Jürgen Lassak, Lauri Peil, Gemma C. Atkinson, Kai Virumäe, Tanel Tenson, Jaanus Remme, Kirsten Jung, Daniel N. Wilson Nucleic Acids Research 42, 10711-10719 (2014) |
| 107 |
Structures of Nascent Polypeptide Chain-Dependent-Stalled Ribosome Complexes Daniel N. Wilson , Roland Beckmann -/- Herausgeber: Koreaki Ito Regulatory Nascent Polypeptides 45-59 (2014), Verlag: Springer Japan |
| 106 |
Ribosome Stalling at Diprolyl Motifs Is Alleviated by Elongation Factor P Agata L. Starosta, Daniel N. Wilson -/- Herausgeber: Koreaki Ito Regulatory Nascent Polypeptides 99-116 (2014), Verlag: Springer Japan |
2013 | |
| 105 |
On the use of the antibiotic chloramphenicol to target polypeptide chain mimics to the ribosomal exit tunnel Petros Mamos, Marios G. Krokidis, Athanassios Papadas, Panagiotis Karahalios, Agata L. Starosta, Daniel N. Wilson , Dimitrios L. Kalpaxis, George P. Dinos Biochimie 95, 1765-1772 (2013) |
| 104 |
Translation von Polyprolin-Proteinen (Translation of polyproline-proteins) Jürgen Lassak, Susanne Ude, Agata L. Starosta, Daniel N. Wilson , Kirsten Jung BIOspektrum 19, 616-618 (2013) |
| 103 |
Amythiamicin D and Related Thiopeptides as Inhibitors of the Bacterial Elongation Factor EF-Tu: Modification of the Amino Acid at Carbon Atom C2 of Ring C Dramatically Influences Activity Stefan Gross, Fabian Nguyen, Matthias Bierschenk, Daniel Sohmen, Thomas Menzel, Iris Antes, Daniel N. Wilson , Thorsten Bach ChemMedChem 8, 1954-1962 (2013) |
| 102 |
Structures of the human and Drosophila 80S ribosome Andreas M. Anger, Jean-Paul Armache, Otto Berninghausen, Michael Habeck, Marion Subklewe, Daniel N. Wilson , Roland Beckmann Nature 497, 80-85 (2013) |
| 101 |
Promiscuous behaviour of archaeal ribosomal proteins: Implications for eukaryotic ribosome evolution Jean-Paul Armache, Andreas M. Anger, Viter Márquez, Sibylle Franckenberg, Thomas Fröhlich, Elizabeth Villa, Otto Berninghausen, Michael Thomm, Georg J. Arnold, Roland Beckmann, Daniel N. Wilson Nucleic Acids Research 41, 1284-1293 (2013) |
| 100 |
Structural basis for potent inhibitory activity of the antibiotic tigecycline during protein synthesis Lasse Jenner, Agata L. Starosta, Daniel S. Terry, Aleksandra Mikolajka, Liudmila Filonava, Marat Yusupov, Scott C. Blanchard, Daniel N. Wilson , Gulnara Yusupova Proceedings of the National Academy of Sciences of the United States of America 110, 3812-3816 (2013) |
| 99 |
Distinct XPPX sequence motifs induce ribosome stalling, which is rescued by the translation elongation factor EF-P Lauri Peil, Agata L. Starosta, Jürgen Lassak, Gemma C. Atkinson, Kai Virumäe, Michaela Spitzer, Tanel Tenson, Kirsten Jung, Jaanus Remme, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 110, 15265-15270 (2013) |
| 98 |
Nascent
peptides that block protein synthesis in bacteria Christopher J. Woolstenhulme, Shankar Parajuli, David W. Healey, Diana P. Valverde, E. Nicholas Petersen, Agata L. Starosta, Nicholas R. Guydosh, W. Evan Johnson, Daniel N. Wilson , Allen R. Buskirk Proceedings of the National Academy of Sciences of the United States of America 110, E878-E887 (2013) |
| 97 |
Translation Elongation Factor EF-P Alleviates Ribosome Stalling at Polyproline Stretches Susanne Ude, Jürgen Lassak, Agata L. Starosta, Tobias Kraxenberger, Daniel N. Wilson , Kirsten Jung Science 339, 82-85 (2013) |
| 96 |
Peptidyltransferase Inhibitors of the Bacterial Ribosome Daniel N. Wilson -/- Herausgeber: Claudio O. Gualerzi, Letizia Brandi, Attilio Fabbretti, Cynthia L. Pon Antibiotics: Targets, Mechanisms and Resistance 471-490 (2013), Verlag: Wiley-VCH, Weinheim |
2012 | |
| 95 |
Target- and resistance-based mechanistic studies with TP-434, a novel fluorocycline antibiotic Trudy H. Grossman, Agata L. Starosta, Corey Fyfe, William O'Brien, David M. Rothstein, Aleksandra Mikolajka, Daniel N. Wilson , Joyce A. Sutcliffe Antimicrobial Agents and Chemotherapy 56, 2559-2564 (2012) Erratum: Antimicrobial Agents and Chemotherapy 59, 5870-5870 (2015) |
| 94 |
Mechanisms of SecM-Mediated Stalling in the Ribosome James Gumbart, Eduard Schreiner, Daniel N. Wilson , Roland Beckmann, Klaus Schulten Biophysical Journal 103, 331-341 (2012) |
| 93 |
Ribosomal crystallography: Peptide bond formation and its inhibition Anat Bashan, Raz Zarivach, Frank Schluenzen, Ilana Agmon, Joerg M. Harms, Tamar Auerbach, David Baram, Rita Berisio, Heike Bartels, Harly A. S. Hansen, Paola Fucini, Daniel N. Wilson , Moshe Peretz, Maggie Kessler, Ada E. Yonath Biopolymers 79, 19-41 (2012) |
| 92 |
The structure and function of the eukaryotic ribosome Daniel N. Wilson , Jamie H. D. Cate Cold Spring Harbor Perspectives in Biology 4 (5) a011536 (2012) |
| 91 |
Lys34 of translation elongation factor EF-P is hydroxylated by YfcM Lauri Peil, Agata L. Starosta, Kai Virumäe, Gemma C. Atkinson, Tanel Tenson, Jaanus Remme, Daniel N. Wilson Nature Chemical Biology 8, 695-697 (2012) |
| 90 |
The DARC site: a database of aligned ribosomal complexes Alexander Jarasch, Philipp Dziuk, Thomas Becker, Jean-Paul Armache, Andreas Hauser, Daniel N. Wilson , Roland Beckmann Nucleic Acids Research 40 (Database issue) D495-D500 (2012) |
| 89 |
Structural basis for TetM-mediated tetracycline resistance Alexandra Dönhöfer, Sibylle Franckenberg, Stephan Wickles, Otto Berninghausen, Roland Beckmann, Daniel N. Wilson Proceedings of the National Academy of Sciences of the United States of America 109, 16900-16905 (2012) |
2011 | |
| 88 |
On the specificity of antibiotics targeting the large ribosomal subunit Daniel N. Wilson Annals of the New York Academy of Sciences 1241 (Antimicrobial Therapeutics Reviews) 1-16 (2011) |
| 87 |
Molecular basis for the selectivity of antituberculosis compounds capreomycin and viomycin Rashid Akbergenov, Dmitri Shcherbakov, Tanja Matt, Stefan Duscha, Martin Meyer, Daniel N. Wilson , Erik C. Bottger Antimicrobial Agents and Chemotherapy 55, 4712-4717 (2011) |
| 86 |
Differential Effects of Thiopeptide and Orthosomycin Antibiotics on Translational GTPases Aleksandra Mikolajka, Hanqing Liu, Yuanwei Chen, Agata L. Starosta, Viter Márquez, Marina Ivanova, Barry S. Cooperman, Daniel N. Wilson Chemistry & Biology 18, 589-600 (2011) |
| 85 |
The ribosomal tunnel as a functional environment for nascent polypeptide folding and translational stalling Daniel N. Wilson , Roland Beckmann Current Opinion in Structural Biology 21, 274-282 (2011) |
| 84 |
Proteomic Characterization of Archaeal Ribosomes Reveals the Presence of Novel Archaeal-Specific Ribosomal Proteins Viter Márquez, Thomas Fröhlich, Jean-Paul Armache, Daniel Sohmen, Alexandra Dönhöfer, Aleksandra Mikolajka, Otto Berninghausen, Michael Thomm, Roland Beckmann, Georg J. Arnold, Daniel N. Wilson Journal of Molecular Biology 405, 1215-1232 (2011) |
| 83 |
Peptides in the Ribosomal Tunnel Talk Back Daniel N. Wilson Molecular Cell 41, 247-248 (2011) |
| 82 |
Antibiotic-induced ribosomal assembly defects result from changes in the synthesis of ribosomal proteins Triinu Siibak, Lauri Peil, Alexandra Dönhöfer, Age Tats, Maido Remm, Daniel N. Wilson , Tanel Tenson, Jaanus Remme Molecular Microbiology 80, 54-67 (2011) |
| 81 |
SecM-Stalled ribosomes adopt an altered geometry at the peptidyl transferase center Shashi Bhushan, Thomas Hoffmann, Birgit Seidelt, Jens Frauenfeld, Thorsten Mielke, Otto Berninghausen, Daniel N. Wilson , Roland Beckmann PLoS Biology 9, e1000581 (2011) |
| 80 |
Nascent polypeptide chains within the ribosomal tunnel analyzed by cryo-EM Daniel N. Wilson , Shashi Bhushan, Thomas Becker, Roland Beckmann -/- Herausgeber: Marina V. Rodnina, Wolfgang Wintermeyer, Rachel Green Ribosomes: Structure, Function and Dynamics 393-404 (2011), Verlag: Springer-Verlag, Wien |
2010 | |
| 79 |
Interplay between the Ribosomal Tunnel, Nascent Chain, and Macrolides Influences Drug Inhibition Agata L. Starosta, Viktoriya V. Karpenko, Anna V. Shishkina, Aleksandra Mikolajka, Natalia V. Sumbatyan, Frank Schluenzen, Galina A. Korshunova, Alexey A. Bogdanov, Daniel N. Wilson Chemistry & Biology 17, 504-514 (2010) |
| 78 |
Probing Translation with Small-Molecule Inhibitors Scott C. Blanchard, Barry S. Cooperman, Daniel N. Wilson Chemistry & Biology 17, 633-645 (2010) |
| 77 |
PSRP1 is not a Ribosomal Protein, but a Ribosome-binding Factor that is Recycled by the Ribosome-recycling Factor (RRF) and Elongation Factor G (EF-G) Manjuli R. Sharma, Alexandra Dönhöfer, Chandana Barat, Viter Márquez, Partha P. Datta, Paola Fucini, Daniel N. Wilson , Rajendra K. Agrawal Journal of Biological Chemistry 285, 4006-4014 (2010) |
| 76 |
Structural Basis for Translational Stalling by Human Cytomegalovirus and Fungal Arginine Attenuator Peptide Shashi Bhushan, Helge Meyer, Agata L. Starosta, Thomas Becker, Thorsten Mielke, Otto Berninghausen, Michael Sattler, Daniel N. Wilson , Roland Beckmann Molecular Cell 40, 138-146 (2010) |
| 75 |
Head swivel on the ribosome facilitates translocation by means of intra-subunit tRNA hybrid sites Andreas H. Ratje, Justus Loerke, Aleksandra Mikolajka, Matthias Brünner, Peter W. Hildebrand, Agata L. Starosta, Alexandra Dönhöfer, Sean R. Connell, Paola Fucini, Thorsten Mielke, Paul C. Whitford, José N. Onuchic, Yanan Yu, Karissa Y. Sanbonmatsu, Roland K. Hartmann, Pawel A. Penczek, Daniel N. Wilson , Christian M. T. Spahn Nature 468, 713-716 (2010) |
| 74 |
α-Helical nascent polypeptide chains visualized within distinct regions of the ribosomal exit tunnel Shashi Bhushan, Marco Gartmann, Mario Halic, Jean-Paul Armache, Alexander Jarasch, Thorsten Mielke, Otto Berninghausen, Daniel N. Wilson , Roland Beckmann Nature Structural & Molecular Biology 17, 313-317 (2010) |
| 73 |
Cryo-EM structure and rRNA model of a translating eukaryotic 80s ribosome at 5.5-Å resolution Jean-Paul Armache, Alexander Jarasch, Andreas M. Anger, Elizabeth Villa, Thomas Becker, Shashi Bhushan, Fabrice Jossinet, Michael Habeck, Gülcin Dindar, Sibylle Franckenberg, Viter Márquez, Thorsten Mielke, Michael Thomm, Otto Berninghausen, Birgitta Beatrix, Johannes Söding, Eric Westhof, Daniel N. Wilson , Roland Beckmann Proceedings of the National Academy of Sciences of the United States of America 107 (46) 19748-19753 (2010) |
| 72 |
Localization of eukaryote-specific ribosomal proteins in a 5.5-Å cryo-EM map of the 80S eukaryotic ribosome Jean-Paul Armache, Alexander Jarasch, Andreas M. Anger, Elizabeth Villa, Thomas Becker, Shashi Bhushan, Fabrice Jossinet, Michael Habeck, Gülcin Dindar, Sibylle Franckenberg, Viter Márquez, Thorsten Mielke, Michael Thomm, Otto Berninghausen, Birgitta Beatrix, Johannes Söding, Eric Westhof, Daniel N. Wilson , Roland Beckmann Proceedings of the National Academy of Sciences of the United States of America 107, 19754-19759 (2010) |
| 71 |
The E site and its importance for improving accuracy and preventing frameshifts Markus Pech, Oliver Vesper, Hiroshi Yamamoto, Daniel N. Wilson , Knud H. Nierhaus -/- Herausgeber: John F. Atkins, Raymond F. Gesteland Nucleic Acids and Molecular Biology 24 (Recoding: Expansion of Decoding Rules Enriches Gene Expression) 345-362 (2010) |
2009 | |
| 70 |
Non-Hydrolyzable RNA-Peptide Conjugates: A Powerful Advance in the Synthesis of Mimics for 3'-Peptidyl tRNA Termini Holger Moroder, Jessica Steger, Dagmar Graber, Katja Fauster, Krista Trappl, Viter Márquez, Norbert Polacek, Daniel N. Wilson , Ronald Micura Angewandte Chemie, International Edition 48, 4056-4060 (2009) Translated: Angewandte Chemie 121, 4116-4120 (2009) |
| 69 |
Distinct mode of interaction of a novel ketolide antibiotic that displays enhanced antimicrobial activity Ekaterini C. Kouvela, Dimitrios L. Kalpaxis, Daniel N. Wilson , George P. Dinos Antimicrobial Agents and Chemotherapy 53, 1411-1419 (2009) |
| 68 |
The final step of hygromycin A biosynthesis, oxidation of C-5''-dihydrohygromycin A, is linked to a putative proton gradient-dependent efflux Vidya Dhote, Agata L. Starosta, Daniel N. Wilson , Kevin A. Reynolds Antimicrobial Agents and Chemotherapy 53, 5163-5172 (2009) |
| 67 |
SnapShot: Antibiotic inhibition of protein synthesis I Daniel Sohmen, Joerg M. Harms, Frank Schluenzen, Daniel N. Wilson Cell 138, 1248-1248.e1 (2009) |
| 66 |
Enhanced SnapShot: Antibiotic inhibition of protein synthesis II Daniel Sohmen, Joerg M. Harms, Frank Schluenzen, Daniel N. Wilson Cell 139, 212-212.e1 (2009) |
| 65 |
Identification of Distinct Thiopeptide-Antibiotic Precursor Lead Compounds Using Translation Machinery Assays Agata L. Starosta, Haiou Qin, Aleksandra Mikolajka, Gulice Y. C. Leung, Kathrin Schwinghammer, Kyriacos C. Nicolaou, David Y.-K. Chen, Barry S. Cooperman, Daniel N. Wilson Chemistry & Biology 16, 1087-1096 (2009) |
| 64 |
Biosynthesis of the aminocyclitol subunit of hygromycin A in Streptomyces hygroscopicus NRRL 2388 Nadaraj Palaniappan, Vidya Dhote, Sloan Ayers, Agata L. Starosta, Daniel N. Wilson , Kevin A. Reynolds Chemistry & Biology 16, 1180-1189 (2009) |
| 63 |
The A-Z of bacterial translation inhibitors Daniel N. Wilson Critical Reviews in Biochemistry and Molecular Biology 44, 393-433 (2009) |
| 62 |
Time-Resolved Binding of Azithromycin to Escherichia coli Ribosomes Alexandros D. Petropoulos, Ekaterini C. Kouvela, Agata L. Starosta, Daniel N. Wilson , George P. Dinos, Dimitrios L. Kalpaxis Journal of Molecular Biology 385, 1179-1192 (2009) |
| 61 |
Less is more for leaderless mRNA translation Daniel N. Wilson Molecular Cell 33, 141-142 (2009) |
| 60 |
Structural Insight into Nascent Polypeptide Chain-Mediated Translational Stalling Birgit Seidelt, C. Axel Innis, Daniel N. Wilson , Marco Gartmann, Jean-Paul Armache, Elizabeth Villa, Leonardo G. Trabuco, Thomas Becker, Thorsten Mielke, Klaus Schulten, Thomas A. Steitz, Roland Beckmann Science 326, 1412-1415 (2009) |
| 59 |
Factor-Mediated Ribosome Assembly in Bacteria Alexandra Dönhöfer, Manjuli R. Sharma, Partha P. Datta, Knud H. Nierhaus, Rajendra K. Agrawal, Daniel N. Wilson Encyclopedia of Life Sciences (2009), Verlag: John Wiley & Sons, Chichester |
| 58 |
Inhibitors of Initiation Phase of Bacterial Protein Synthesis Viter Márquez, Daniel Sohmen, Daniel N. Wilson Encyclopedia of Life Sciences (2009), Verlag: John Wiley & Sons, Chichester |
| 57 |
Inhibitors of the Elongation Cycle of Protein Synthesis Daniel N. Wilson , Agata L. Starosta, Hiroshi Yamamoto, Knud H. Nierhaus Encyclopedia of Life Sciences (2009), Verlag: John Wiley & Sons, Chichester |
| 56 |
Ribosomal
Proteins: Role in Ribosomal Functions Daniel N. Wilson , Romi Gupta, Aleksandra Mikolajka, Knud H. Nierhaus Encyclopedia of Life Sciences online: 15 September, 2009 (2009), Verlag: John Wiley & Sons, Chichester |
2008 | |
| 55 |
The Role of 23S Ribosomal RNA Residue A2451 in Peptide Bond Synthesis Revealed by Atomic Mutagenesis Kathrin Lang, Matthias Erlacher, Daniel N. Wilson , Ronald Micura, Norbert Polacek Chemistry & Biology 15, 485-492 (2008) |
| 54 |
New features of the ribosome and ribosomal inhibitors: non-enzymatic recycling, misreading and back-translocation Witold Szaflarski, Oliver Vesper, Yoshika Teraoka, Beata Plitta, Daniel N. Wilson , Knud H. Nierhaus Journal of Molecular Biology 380, 193-205 (2008) |
| 53 |
Translational regulation via L11: molecular switches on the ribosome turned on and off by thiostrepton and micrococcin Joerg M. Harms, Daniel N. Wilson , Frank Schluenzen, Sean R. Connell, Torsten Stachelhaus, Zaneta Zaborowska, Christian M. T. Spahn, Paola Fucini Molecular Cell 30, 26-38 (2008) |
| 52 |
A new tRNA intermediate revealed on the ribosome during EF4-mediated back-translocation Sean R. Connell, Maya Topf, Yan Qin, Daniel N. Wilson , Thorsten Mielke, Paola Fucini, Knud H. Nierhaus, Christian M. T. Spahn Nature Structural & Molecular Biology 15, 910-915 (2008) |
| 51 |
Shine-Dalgarno interaction prevents incorporation of noncognate amino acids at the codon following the AUG Viviana Di Giacco, Viter Márquez, Yan Qin, Markus Pech, Francisco J. Triana-Alonso, Daniel N. Wilson , Knud H. Nierhaus Proceedings of the National Academy of Sciences of the United States of America 105, 10715-10720 (2008) |
| 50 |
The oxazolidinone antibiotics perturb the ribosomal peptidyl-transferase center and effect tRNA positioning Daniel N. Wilson , Frank Schluenzen, Joerg M. Harms, Agata L. Starosta, Sean R. Connell, Paola Fucini Proceedings of the National Academy of Sciences of the United States of America 105, 13339-13344 (2008) |
| 49 |
Antibiotic inhibition of ribosome function Daniel N. Wilson -/- Herausgeber: Thomas A. Steitz The Mechanisms of Ribosome Function: Insights into protein synthesis (2008), Verlag: Henry Stewart Talks Ltd, London |
| 48 |
lepA as a target for antibacterial agents Knud H. Nierhaus, Yan Qin, Daniel N. Wilson -/- Anmelder: Max-Planck-Gesellschaft Patent: WO 2008046584 (A2) 2008-04-24 |
2007 | |
| 47 |
The weird and wonderful world of bacterial ribosome regulation Daniel N. Wilson , Knud H. Nierhaus Critical Reviews in Biochemistry and Molecular Biology 42, 187-219 (2007) |
| 46 |
Structural basis for interaction of the ribosome with the switch regions of GTP-bound elongation factors Sean R. Connell, Chie Takemoto, Daniel N. Wilson , Hongfei Wang, Kazutaka Murayama, Takaho Terada, Mikako Shirouzu, Maximilian Rost, Martin Schüler, Jan Giesebrecht, Marylena Dabrowski, Thorsten Mielke, Paola Fucini, Shigeyuki Yokoyama, Christian M. T. Spahn Molecular Cell 25, 751-764 (2007) |
| 45 |
The oxazolidinone class of drugs find their orientation on the ribosome Daniel N. Wilson , Knud H. Nierhaus Molecular Cell 26, 460-462 (2007) |
| 44 |
Structural aspects of RbfA action during small ribosomal subunit assembly Partha P. Datta, Daniel N. Wilson , Masahito Kawazoe, Neil K. Swami, Tatsuya Kaminishi, Manjuli R. Sharma, Timothy M. Booth, Chie Takemoto, Paola Fucini, Shigeyuki Yokoyama, Rajendra K. Agrawal Molecular Cell 28, 434-445 (2007) |
| 43 |
Cryo-EM study of the spinach chloroplast ribosome reveals the structural and functional roles of plastid-specific ribosomal proteins Manjuli R. Sharma, Daniel N. Wilson , Partha P. Datta, Chandana Barat, Frank Schluenzen, Paola Fucini, Rajendra K. Agrawal Proceedings of the National Academy of Sciences of the United States of America 104, 19315-19320 (2007) |
| 42 |
A Snapshot of the 30S Ribosomal Subunit Capturing mRNA via the Shine-Dalgarno Interaction Tatsuya Kaminishi, Daniel N. Wilson , Chie Takemoto, Joerg M. Harms, Masahito Kawazoe, Frank Schluenzen, Kyoko Hanawa-Suetsugu, Mikako Shirouzu, Paola Fucini, Shigeyuki Yokoyama Structure 15, 289-297 (2007) |
| 41 |
Protein synthesis inhibitors Daniel N. Wilson , Ulrich Stelzl, Knud H. Nierhaus -/- Herausgeber: Michael M. Cox, George N Phillips Handbook of Proteins 1, 258-270 (2007) |
| 40 |
Use of lepA G protein for improving the accuracy of protein synthesis in-vitro Knud H. Nierhaus, Yan Qin, Daniel N. Wilson -/- Anmelder: Max-Planck-Gesellschaft Patent: WO 2007003410 (A1) 2007-01-11 |
2006 | |
| 39 |
EF-G-Dependent GTPase on the Ribosome. Conformational Change and Fusidic Acid Inhibition Hyuk-Soo Seo, Sameem Abedin, Detlev Kamp, Daniel N. Wilson , Knud H. Nierhaus, Barry S. Cooperman Biochemistry 45, 2504-2514 (2006) |
| 38 |
The highly conserved LepA is a ribosomal elongation factor that back-translocates the ribosome Yan Qin, Norbert Polacek, Oliver Vesper, Eike Staub, Edda Einfeldt, Daniel N. Wilson , Knud H. Nierhaus Cell 127, 721-733 (2006) |
| 37 |
The E-site story: the importance of maintaining two tRNAs on the ribosome during protein synthesis Daniel N. Wilson , Knud H. Nierhaus Cellular and Molecular Life Sciences 63, 2725-2737 (2006) |
| 36 |
Ribosome recycling revisited Oliver Vesper, Daniel N. Wilson Molecular Biology 40 (4) 664-672 (2006) Translated: Molekuliarnaia biologiia 40, 742-750 (2006) |
| 35 |
On the mechanism of action of 9-O-arylalkyloxime derivatives of 6-O-mycaminosyltylonolide, a new class of 16-membered macrolide antibiotics Panagiotis Karahalios, Dimitrios L. Kalpaxis, Hong Fu, Leonard Katz, Daniel N. Wilson , George P. Dinos Molecular Pharmacology 70, 1271-1280 (2006) |
| 34 |
The antibiotic kasugamycin mimics mRNA nucleotides to destabilize tRNA binding and inhibit canonical translation initiation Frank Schluenzen, Chie Takemoto, Daniel N. Wilson , Tatsuya Kaminishi, Joerg M. Harms, Kyoko Hanawa-Suetsugu, Witold Szaflarski, Masahito Kawazoe, Mikako Shirouzu, Knud H. Nierhaus, Shigeyuki Yokoyama, Paola Fucini Nature Structural & Molecular Biology 13, 871-878 (2006) Erratum: Nature Structural & Molecular Biology 13, 1033-1033 (2006) |
| 33 |
Ribosomal Proteins: Role in Ribosomal Functions Daniel N. Wilson , Knud H. Nierhaus Encyclopedia of Life Sciences Online: 24 APR 2006 (2006), Verlag: John Wiley & Sons, Chichester |
| 32 |
Screening method for ribosome recycling inhibitor Daniel N. Wilson , Frank Schluenzen, Joerg M. Harms, Renate Albrecht, Jörg Bürger, Takuya Yoshida, Tadayasu Ohkubo, Yuji Kobayashi, Paola Fucini -/- Anmelder: Osaka University, Max-Planck-Gesellschaft Patent: WO 2006059807 (A1) 2006-06-08 |
2005 | |
| 31 |
Species-specific antibiotic-ribosome interactions: Implications for drug development Daniel N. Wilson , Joerg M. Harms, Knud H. Nierhaus, Frank Schluenzen, Paola Fucini Biological Chemistry 386, 1239-1252 (2005) |
| 30 |
Ribosomal proteins in the spotlight Daniel N. Wilson , Knud H. Nierhaus Critical Reviews in Biochemistry and Molecular Biology 40, 243-267 (2005) |
| 29 |
X-ray crystallography study on ribosome recycling: the mechanism of binding and action of RRF on the 50S ribosomal subunit Daniel N. Wilson , Frank Schluenzen, Joerg M. Harms, Takuya Yoshida, Tadayasu Ohkubo, Renate Albrecht, Jörg Bürger, Yuji Kobayashi, Paola Fucini EMBO Journal 24, 251-260 (2005) |
| 28 |
Interaction of Era with the 30S ribosomal subunit: Implications for 30S subunit assembly Manjuli R. Sharma, Chandana Barat, Daniel N. Wilson , Timothy M. Booth, Masahito Kawazoe, Chie Hori-Takemoto, Mikako Shirouzu, Shigeyuki Yokoyama, Paola Fucini, Rajendra K. Agrawal Molecular Cell 18, 319-329 (2005) |
| 27 |
RelBE or not to be Daniel N. Wilson , Knud H. Nierhaus Nature Structural & Molecular Biology 12, 282-284 (2005) |
| 26 |
Deacylated tRNA is released from the E site upon A site occupation but before GTP is hydrolyzed by EF-Tu George P. Dinos, Dimitrios L. Kalpaxis, Daniel N. Wilson , Knud H. Nierhaus Nucleic Acids Research 33, 5291-5296 (2005) |
| 25 |
High heterogeneity within the ribosomal proteins of the Arabidopsis thaliana 80S ribosome. Patrick Giavalisco, Daniel N. Wilson , Thomas Kreitler, Hans Lehrach, Joachim Klose, Johan Gobom, Paola Fucini Plant Molecular Biology 57, 577-591 (2005) |
| 24 |
The Binding Mode of the Trigger Factor on the Ribosome: Implications for Protein Folding and SRP Interaction Frank Schluenzen, Daniel N. Wilson , Pingsheng Tian, Joerg M. Harms, Stuart J. McInnes, Harly A. S. Hansen, Renate Albrecht, Jörg Bürger, Sigurd M. Wilbanks, Paola Fucini Structure 13, 1685-1694 (2005) |
2004 | |
| 23 |
ERA protein binds in a functionally important region of the 30S ribosomal subunit Manjuli R. Sharma, Chandana Barat, Daniel N. Wilson , Chie Takemoto, Timothy M. Booth, Shigeyuki Yokoyama, Paola Fucini, Rajendra K. Agrawal Biophysical Journal 86, 316A-317A (2004) |
| 22 |
Maintaining the ribosomal reading frame: The influence of the E site during translational regulation of release factor 2 Viter Márquez, Daniel N. Wilson , Warren P. Tate, Francisco J. Triana-Alonso, Knud H. Nierhaus Cell 118, 45-55 (2004) |
| 21 |
Polyamines Affect Diversely the Antibiotic Potency: Insight Gained From Kinetic Studies of the Blasticidin S and Spiramycin Interactions with Functional Ribosomes Alexandros D. Petropoulos, Maria A. Xaplanteri, George P. Dinos, Daniel N. Wilson , Dimitrios L. Kalpaxis Journal of Biological Chemistry 279, 26518-26525 (2004) |
| 20 |
Dissecting the ribosomal inhibition mechanisms of edeine and pactamycin: The universally conserved residues G693 and C795 regulate P-site RNA binding George P. Dinos, Daniel N. Wilson , Yoshika Teraoka, Witold Szaflarski, Paola Fucini, Dimitrios L. Kalpaxis, Knud H. Nierhaus Molecular Cell 13, 113-124 (2004) |
| 19 |
The how and Y of cold shock Daniel N. Wilson , Knud H. Nierhaus Nature Structural & Molecular Biology 11, 1026-1028 (2004) |
| 18 |
Protein Synthesis and Ribosome Structure: Translating the Genome Herausgeber: Knud H. Nierhaus, Daniel N. Wilson 579 pp (2004) |
| 17 |
Antibiotics and the Inhibition of Ribosome Function Daniel N. Wilson Protein Synthesis and Ribosome Structure 449-527 (2004), ISBN 9783527306381 |
| 16 |
Initiation of Protein Synthesis. 1. Initiation of Protein Synthesis in Eubacteria Daniel N. Wilson Protein Synthesis and Ribosome Structure: Translating the Genome 219-239 (2004), ISBN 9783527306381 |
| 15 |
Termination
and Ribosome Recycling Daniel N. Wilson Protein Synthesis and Ribosome Structure: Translating the Genome 367-395 (2004), ISBN 9783527306381 |
2003 | |
| 14 |
Ribosome structure and translation. The ribosome through the looking glass (Das Ribosom unter der Lupe ) Daniel N. Wilson , Knud H. Nierhaus Angewandte Chemie, International Edition 42, 3464-3486 (2003) Translated: Angewandte Chemie 115, 3586-3610 (2003) |
| 13 |
Mapping functionally important motifs SPF and GGQ of the decoding release factor RF2 to the Escherichia coli ribosome by hydroxyl radical footprinting Debbie-Jane G. Scarlett, Kim K. McCaughan, Daniel N. Wilson , Warren P. Tate Journal of Biological Chemistry 278, 15095-15104 (2003) |
| 12 |
Localization of the Trigger Factor Binding Site on the Ribosomal 50 S Subunit Gregor Blaha, Daniel N. Wilson , Gerlind Stoller, Gunter Fischer, Regine Willumeit , Knud H. Nierhaus Journal of Molecular Biology 326, 887-897 (2003) |
| 11 |
Molecular mimicry in the decoding of translational stop signals Elizabeth S. Poole, Marjan E. Askarian-Amiri, Louise L. Major, Kim K. McCaughan, Debbie-Jane G. Scarlett, Daniel N. Wilson , Warren P. Tate Progress in Nucleic Acid Research and Molecular Biology 74, 83-121 (2003) |
2002 | |
| 10 |
Functions and interplay of the tRNA-binding sites of the ribosome Viter Márquez, Daniel N. Wilson , Knud H. Nierhaus Biochemical Society Transactions 30, 133-140 (2002) |
| 9 |
Protein synthesis at atomic resolution: mechanistics of translation in the light of highly resolved structures for the ribosome Daniel N. Wilson , Gregor Blaha, Sean R. Connell, Pavel V. Ivanov, Holger Jenke, Ulrich Stelzl, Yoshika Teraoka, Knud H. Nierhaus Current Protein and Peptide Science 3, 1-53 (2002) |
| 8 |
Codon-anticodon interaction at the P site is a prerequisite for tRNA interaction with the small ribosomal subunit Markus A. Schäfer, A. Özlem Tastan, Sebastian Patzke, Gregor Blaha, Christian M. T. Spahn, Daniel N. Wilson , Knud H. Nierhaus Journal of Biological Chemistry 277, 19095-19105 (2002) |
| 7 |
Dissection of the mechanism for the stringent factor RelA Thomas M. Wendrich, Gregor Blaha, Daniel N. Wilson , Mohamed A. Marahiel, Knud H. Nierhaus Molecular Cell 10, 779-788 (2002) |
2000 | |
| 6 |
The ribosomal binding and peptidyl-tRNA hydrolysis functions of Escherichia coli release factor 2 are linked through residue 246 Daniel N. Wilson , Diane Guevremont, Warren P. Tate RNA 6, 1704-1713 (2000) |
| 5 |
Factor-mediated termination of protein synthesis: a welcome return to the mainstream of translation Daniel N. Wilson , Mark E. Dalphin, Herman J. Pel, Louise L. Major, John B. Mansell, Warren P. Tate -/- Herausgeber: Roger A. Garrett, Stephen R. Douthwate, Anders Liljas, Alistair T. Matheson, Peter B. Moore, Harry F. Noller The Ribosome: Structure, Function, Antibiotics, and Cellular Interactions 495-508 (2000), ISBN 9781555811846 , Verlag: ASM press, Washington DC |
1999 | |
| 4 |
UGA: a dual signal for "stop" and for recoding in protein synthesis Warren P. Tate, John B. Mansell, Sally A. Mannering, J. H. Irvine, Louise L. Major, Daniel N. Wilson Biochemistry (Moscow) 64, 1342-1353 (1999) Translated: Biokhimiya 64, 1593-1606 (1999) |
| 3 |
A conformational switch region between functional domains regulates activity of RF2 Daniel N. Wilson -/- Betreuer: Warren P. Tate Dissertation, University of Otago, Dunedin, New Zealand 156 pp (1999) |
1995 | |
| 2 |
Translational termination efficiency in both bacteria and mammals is regulated by the base following the stop codon Warren P. Tate, Elizabeth S. Poole, Julie A. Horsfield, Sally A. Mannering, Chris M. Brown, John G. Moffat, Mark E. Dalphin, Kim K. McCaughan, Louise L. Major, Daniel N. Wilson Biochemistry and Cell Biology 73, 1095-1103 (1995) |
| 1 |
Prokaryotic ribosomes recode the HIV-1 gag-pol-1 frameshift sequence by an E/P site post-translocation simultaneous slippage mechanism Julie A. Horsfield, Daniel N. Wilson , Sally A. Mannering, Frances M. Adamski, Warren P. Tate Nucleic Acids Research 23, 1487-1494 (1995) |